Category: Modeling

Marco S. Nobile, Associate Professor with the Ca' Foscari University of Venice, Italy

New paper published on Symmetry

One of the core topics of our research group is mechanistic biochemical modeling. The analysis of such models is often performed using simulations, which can be extreme from a computational point of view. Hence, we worked a lot on the acceleration of methods. In order to investigate the performances our algorithms, we need a large …

New protocol published

The new book “Leukemia Stem Cells: Methods and Protocols” — part of Springer’s Methods in Molecular Biology book series (volume 2185, edited by César Cobaleda and Isidro Sánchez-García) — contains a chapter describing the experimental and computational protocol that we developed for the investigation of cell proliferation in human Acute Myeloid Leukemia xenografts. The protocol …

IEEE WCCI: triplete!

This year, the IEEE World Congress on Computational Intelligence (WCCI) will be held in Glasgow, UK. The WCCI embeds three major IEEE conferences related to Computational Intelligence, that is: The International Joint Conference on Neural Networks (IJCNN) The International Conference on Fuzzy Systems (FUZZ-IEEE) The World Congress on Evolutionary Computation (CEC) This year, I had …

New paper accepted on IEEE Transactions on Fuzzy Systems

We use Fuzzy Logic to create interpretable models of heterogeneous cellular systems characterized by uncertainty…

New paper accepted at IEEE CIBCB 2019

Today our paper “ProCell: Investigating cell proliferation with Swarm Intelligence” was accepted for the forthcoming IEEE Conference on Computational Intelligence for Bioinformatics and Computational Biology (CIBCB 2019) at Certosa di Pontignano (Siena, Italy). The paper, written in cooperation with the European Institute of Oncology, proposes an extended analysis of our tool ProCell, along with its …

New publication: COST action ‘cHiPSet’ book chapter

A book chapter about the Case Study “Towards Human Cell Simulation” lead by me was published today.

New paper published on Bioinformatics

A couple of years ago, we started a collaboration with the IEO (Istituto Europeo di Oncologia). Prof. Pelicci and his staff investigate Acute Myeloid Leukemia (AML), one of the most common hematological malignancies, characterized by high relapse and mortality rates. The guys at IEO are wonderful, brilliant, I learned a lot in these months and …